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Discover/scanpy/Alternatives

Best Alternatives to scanpy

Single-Cell Analysis in Python.

12 similar packages · ranked by shared classifiers & health score · View scanpy →

#1
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Annotated data.

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#2
progressbar2v4.6.0↓

A Python Progressbar library to provide visual (yet text based) progress to long running operations.

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#3
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#4
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Google OR-Tools python libraries and modules

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#5
requests-hardenedv1.3.0↓

A library that overrides the default behaviors of the requests library, and adds new security features.

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#6
mesonv1.12.0↓

A high performance build system

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#7
scalenev2.3.0↓

Scalene: A high-resolution, low-overhead CPU, GPU, and memory profiler for Python with AI-powered optimization suggestions

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#8
cwltoolv3.2.20260720092025↓

Common workflow language reference implementation

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#9
tqdmv4.70.0↓

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#10
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#11
ibm-watsonx-aiv1.7.1↓

IBM watsonx.ai API Client

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#12
gcovrv8.6↓

Generate C/C++ code coverage reports with gcov

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